../../tmp/servers/virsirnadb/210353166
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1761 | 1 | cacctacattgcatgaatata | 21 | |
| NC_001526.2 | Human papillomavirus type 16, complete genome | 575 | ..................... | 595 | 100 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 6776 | ____.t....c.......... | 6760 | 71 |
| NC_001676.1 | Human papillomavirus 54, complete genome | 516 | ___.........tg...____ | 529 | 57 |
| NC_001352.1 | Human papillomavirus - 2, complete genome | 505 | _____............____ | 516 | 57 |
| NC_001352.1 | Human papillomavirus - 2, complete genome | 596 | _..........._________ | 606 | 52 |
| NC_001789.1 | Ovine papillomavirus - 1, complete genome | 3605 | _............________ | 3616 | 57 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 1447 | ___............______ | 1458 | 57 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 6923 | ____.t...a.t......... | 6907 | 66 |
| NC_001838.1 | Common chimpanzee papillomavirus 1, complete genome | 598 | ___..........________ | 607 | 47 |
| NC_001694.1 | Human papillomavirus - 61, complete genome | 579 | _............________ | 590 | 57 |
| NC_001694.1 | Human papillomavirus - 61, complete genome | 1861 | __.t.g.........______ | 1849 | 52 |
| NC_013196.1 | Rattus norvegicus papillomavirus 1 EES-2009, complete genome | 986 | _.g.........c..._____ | 1000 | 61 |
| NC_001593.1 | Human papillomavirus type 53, complete genome | 139 | ...g.........________ | 151 | 57 |
| NC_008188.1 | Human papillomavirus type 103, complete genome | 5576 | ___..........g.._____ | 5588 | 57 |
| NC_014469.1 | Gammapapillomavirus HPV127, complete genome | 5389 | ________.........a... | 5377 | 57 |
| NC_014954.1 | Human papillomavirus type 131, complete genome | 5275 | ________.........a... | 5263 | 57 |
| NC_001576.1 | Human papillomavirus type 10, complete genome | 1940 | __...c.........______ | 1928 | 57 |
| NC_001583.1 | Human papillomavirus type 26, complete genome | 2895 | ____...........______ | 2885 | 52 |
| NC_010739.1 | Ursus maritimus papillomavirus 1, complete genome | 338 | ___.c..........c.cc.. | 321 | 66 |
| NC_015267.1 | Camelus dromedarius papillomavirus type 1, complete genome | 2361 | ___.........t..t.ac.. | 2344 | 66 |
| NC_015267.1 | Camelus dromedarius papillomavirus type 1, complete genome | 6497 | ______..ag.........__ | 6509 | 52 |
| NC_008298.1 | Rousettus aegyptiacus papillomavirus type 1, complete genome | 7591 | ..at.........a.._____ | 7576 | 61 |
| NC_001524.1 | European elk papillomavirus, complete genome | 6978 | _____...gg.........__ | 6991 | 57 |
| NC_012485.1 | Human papillomavirus type 109, complete genome | 6350 | _____...gg.........__ | 6363 | 57 |
| NC_011051.1 | Capreolus capreolus papillomavirus 1, complete genome | 6782 | _____...gg.........__ | 6795 | 57 |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 6245 | ____.........a.._____ | 6256 | 52 |
| NC_001357.1 | Human papillomavirus - 18, complete genome | 6799 | ____.t...act......... | 6783 | 61 |
| NC_004068.1 | Fringilla coelebs papillomavirus, complete genome | 3251 | ___..g.........______ | 3262 | 52 |
| NC_004104.1 | Human papillomavirus type 90, complete genome | 487 | _..........t.________ | 498 | 52 |
| NC_001457.1 | Human papillomavirus type 4, complete genome | 1812 | __.g.........._______ | 1801 | 52 |
| NC_006563.1 | Trichechus manatus latirostris papillomavirus 1, complete genome | 2112 | ________..........c._ | 2123 | 52 |
| NC_008032.1 | Capra hircus papillomavirus type 1, complete genome | 5280 | ___..........________ | 5271 | 47 |
| NC_008297.1 | Canine papillomavirus 3, complete genome | 6335 | ..........___________ | 6344 | 47 |
| NC_011530.1 | Caretta caretta papillomavirus 1, complete genome | 3861 | _________..........__ | 3852 | 47 |
| NC_011531.1 | Chelonia mydas papillomavirus 1, complete genome | 2478 | ______.........._____ | 2487 | 47 |
| NC_012486.1 | Human papillomavirus type 112, complete genome | 528 | ________..........___ | 537 | 47 |
| NC_012486.1 | Human papillomavirus type 112, complete genome | 2436 | _____.........t.cc.._ | 2422 | 57 |
| NC_013035.1 | Human papillomavirus 116, complete genome | 4776 | ___________.......... | 4785 | 47 |
| NC_001691.1 | Human papillomavirus type 50, complete genome | 2918 | ____..t..gtt......... | 2934 | 61 |
| NC_013117.1 | Francolinus leucoscepus papillomavirus 1, complete genome | 2071 | ..tg.c.........c.____ | 2055 | 61 |
| NC_007150.1 | Procyon lotor papillomavirus 1, complete genome | 7823 | ____.........g.gta... | 7807 | 61 |
| NC_003348.1 | Phocoena spinipinnis papillomavirus, complete genome | 7420 | _..g.gt........._____ | 7434 | 57 |
| NC_001522.1 | Bovine papillomavirus - 1, complete genome | 5234 | ______.c.........g.__ | 5246 | 52 |
| NC_008519.1 | Mastomys coucha papillomavirus 2, complete genome | 1034 | _____.t.c.........___ | 1022 | 52 |
| NC_010107.1 | Bandicoot papillomatosis carcinomatosis virus type 1, complete genome | 4469 | .........at..________ | 4457 | 52 |
| NC_010226.1 | Canine papillomavirus 4, complete genome | 1869 | _.g.g........._______ | 1881 | 52 |
| NC_010329.1 | Human papillomavirus type 88, complete genome | 1251 | ____.........gc..____ | 1263 | 52 |